Original Research

Published on 10 Nov 2020

A Pilot Study: Changes of Intestinal Microbiota of Patients With Non-small Cell Lung Cancer in Response to Osimertinib Therapy

in Systems Microbiology

Jing Cong
Yuguang Zhang
Yadong Xue
Chuantao Zhang
Mingjin Xu
Dong Liu
Ruiyan Zhang
Hua Zhu

Frontiers in Microbiology

doi 10.3389/fmicb.2020.583525

3,862 views
9 citations

Original Research

Published on 06 Nov 2020

Combining Microbial Culturing With Mathematical Modeling in an Introductory Course-Based Undergraduate Research Experience

in Systems Microbiology

Robert E. Furrow
Hyunsoo G. Kim
Samah M. R. Abdelrazek
Katherine Dahlhausen
Andrew I. Yao
Jonathan A. Eisen
Mark S. Goldman
John G. Albeck
Marc T. Facciotti

Frontiers in Microbiology

doi 10.3389/fmicb.2020.581903

4,359 views
3 citations

Original Research

Published on 05 Nov 2020

Tackling Real-World Environmental Paper Pollution: A Problem-Based Microbiology Lesson About Carbon Assimilation

in Systems Microbiology

Jackie E. Shay
Ruth Solis
Marcos E. García-Ojeda

Frontiers in Microbiology

doi 10.3389/fmicb.2020.588918

4,663 views
3 citations

Original Research

Published on 05 Nov 2020

Interactions Between Rumen Microbes, VFAs, and Host Genes Regulate Nutrient Absorption and Epithelial Barrier Function During Cold Season Nutritional Stress in Tibetan Sheep

in Systems Microbiology

Xiu Liu
Yuzhu Sha
Renqing Dingkao
Wei Zhang
Weibing Lv
Hong Wei
Hao Shi
Jiang Hu
Jiqing Wang
Shaobin Li

Frontiers in Microbiology

doi 10.3389/fmicb.2020.593062

6,232 views
40 citations

Original Research

Published on 02 Nov 2020

Ozone Decreased Enteric Methane Production by 20% in an in vitro Rumen Fermentation System

in Systems Microbiology

Lucy Zhao
Eleonora Caro
Devin B. Holman
Katherine E. Gzyl
Peter J. Moate
Alex V. Chaves

Frontiers in Microbiology

doi 10.3389/fmicb.2020.571537

4,783 views
9 citations

Original Research

Published on 30 Oct 2020

Nitrate Is Crucial for the Proliferation of Gut Escherichia coli Caused by H9N2 AIV Infection and Effective Regulation by Chinese Herbal Medicine Ageratum-Liquid

in Systems Microbiology

Xinheng Zhang
Qiqi Zhao
Che Wu
Zi Xie
Xiaotong Ci
Hongxin Li
Wencheng Lin
Huanmin Zhang
Qingmei Xie

Frontiers in Microbiology

doi 10.3389/fmicb.2020.555739

3,870 views
10 citations

Review

Published on 30 Oct 2020

Recent Understanding of Soil Acidobacteria and Their Ecological Significance: A Critical Review

in Systems Microbiology

Sadaf Kalam
Anirban Basu
Iqbal Ahmad
R. Z. Sayyed
Hesham Ali El-Enshasy
Daniel Joe Dailin
Ni Luh Suriani

Frontiers in Microbiology

doi 10.3389/fmicb.2020.580024

31,576 views
422 citations

Original Research

Published on 27 Oct 2020

Gene Regulatory Networks of Penicillium echinulatum 2HH and Penicillium oxalicum 114-2 Inferred by a Computational Biology Approach

in Systems Microbiology

Alexandre Rafael Lenz
Edgardo Galán-Vásquez
Eduardo Balbinot
Fernanda Pessi de Abreu
Nikael Souza de Oliveira
Letícia Osório da Rosa
Scheila de Avila e Silva
Marli Camassola
Aldo José Pinheiro Dillon
Ernesto Perez-Rueda

Frontiers in Microbiology

doi 10.3389/fmicb.2020.588263

4,532 views
15 citations

Original Research

Published on 27 Oct 2020

RNMFMDA: A Microbe-Disease Association Identification Method Based on Reliable Negative Sample Selection and Logistic Matrix Factorization With Neighborhood Regularization

in Systems Microbiology

Lihong Peng
Ling Shen
Longjie Liao
Guangyi Liu
Liqian Zhou

Frontiers in Microbiology

doi 10.3389/fmicb.2020.592430

2,686 views
22 citations

Original Research

Published on 26 Oct 2020

Tibetan Sheep Adapt to Plant Phenology in Alpine Meadows by Changing Rumen Microbial Community Structure and Function

in Systems Microbiology

Hongjin Liu
Linyong Hu
Xueping Han
Na Zhao
Tianwei Xu
Li Ma
Xungang Wang
Xiaoling Zhang
Shengping Kang
Xinquan Zhao

Frontiers in Microbiology

doi 10.3389/fmicb.2020.587558

4,414 views
33 citations

Original Research

Published on 23 Oct 2020

Environmental Nutrients Alter Bacterial and Fungal Gut Microbiomes in the Common Meadow Katydid, Orchelimum vulgare

in Systems Microbiology

Melani Muratore
Yvonne Sun
Chelse Prather

Frontiers in Microbiology

doi 10.3389/fmicb.2020.557980

3,200 views
9 citations

Original Research

Published on 23 Oct 2020

Interpretations of Environmental Microbial Community Studies Are Biased by the Selected 16S rRNA (Gene) Amplicon Sequencing Pipeline

in Systems Microbiology

Daniel Straub
Nia Blackwell
Adrian Langarica-Fuentes
Alexander Peltzer
Sven Nahnsen
Sara Kleindienst

Frontiers in Microbiology

doi 10.3389/fmicb.2020.550420

28,491 views
165 citations

Original Research

Published on 22 Oct 2020

Effect of Heat-Inactivated Compound Probiotics on Growth Performance, Plasma Biochemical Indices, and Cecal Microbiome in Yellow-Feathered Broilers

in Systems Microbiology

Cui Zhu
Li Gong
Kaiyong Huang
Fangjun Li
Diqing Tong
Huihua Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2020.585623

6,093 views
38 citations

Methods

Published on 22 Oct 2020

There’re CRISPRs in My Yogurt: A Discovery-Based CURE at the Intersection of Industrial Food Production and the Human Microbiome

in Systems Microbiology

Katherine L. Petrie

Frontiers in Microbiology

doi 10.3389/fmicb.2020.578737

13,982 views
4 citations

Review

Published on 20 Oct 2020

The Russian Doll Model: How Bacteria Shape Successful and Sustainable Inter-Kingdom Relationships

in Systems Microbiology

Enrica Pessione

Frontiers in Microbiology

doi 10.3389/fmicb.2020.573759

5,325 views
9 citations

Original Research

Published on 16 Oct 2020

Screening of Microbes Associated With Swine Growth and Fat Deposition Traits Across the Intestinal Tract

in Systems Microbiology

Shi Tang
Ying Xin
Yunlong Ma
Xuewen Xu
Shuhong Zhao
Jianhua Cao

Frontiers in Microbiology

doi 10.3389/fmicb.2020.586776

7,359 views
55 citations

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Articles

A Pilot Study: Changes of Intestinal Microbiota of Patients With Non-small Cell Lung Cancer in Response to Osimertinib Therapy

Combining Microbial Culturing With Mathematical Modeling in an Introductory Course-Based Undergraduate Research Experience

Tackling Real-World Environmental Paper Pollution: A Problem-Based Microbiology Lesson About Carbon Assimilation

Interactions Between Rumen Microbes, VFAs, and Host Genes Regulate Nutrient Absorption and Epithelial Barrier Function During Cold Season Nutritional Stress in Tibetan Sheep

Ozone Decreased Enteric Methane Production by 20% in an in vitro Rumen Fermentation System

Nitrate Is Crucial for the Proliferation of Gut Escherichia coli Caused by H9N2 AIV Infection and Effective Regulation by Chinese Herbal Medicine Ageratum-Liquid

Recent Understanding of Soil Acidobacteria and Their Ecological Significance: A Critical Review

Gene Regulatory Networks of Penicillium echinulatum 2HH and Penicillium oxalicum 114-2 Inferred by a Computational Biology Approach

RNMFMDA: A Microbe-Disease Association Identification Method Based on Reliable Negative Sample Selection and Logistic Matrix Factorization With Neighborhood Regularization

Tibetan Sheep Adapt to Plant Phenology in Alpine Meadows by Changing Rumen Microbial Community Structure and Function

Environmental Nutrients Alter Bacterial and Fungal Gut Microbiomes in the Common Meadow Katydid, Orchelimum vulgare

Interpretations of Environmental Microbial Community Studies Are Biased by the Selected 16S rRNA (Gene) Amplicon Sequencing Pipeline

Effect of Heat-Inactivated Compound Probiotics on Growth Performance, Plasma Biochemical Indices, and Cecal Microbiome in Yellow-Feathered Broilers

There’re CRISPRs in My Yogurt: A Discovery-Based CURE at the Intersection of Industrial Food Production and the Human Microbiome

The Russian Doll Model: How Bacteria Shape Successful and Sustainable Inter-Kingdom Relationships

Screening of Microbes Associated With Swine Growth and Fat Deposition Traits Across the Intestinal Tract