Original Research

Published on 01 Jun 2021

Assessing the Response of Ruminal Bacterial and Fungal Microbiota to Whole-Rumen Contents Exchange in Dairy Cows

in Systems Microbiology

Madison S. Cox
Courtney L. Deblois
Garret Suen

Frontiers in Microbiology

doi 10.3389/fmicb.2021.665776

4,104 views
16 citations

Original Research

Published on 31 May 2021

Gut Microbial SNPs Induced by High-Fiber Diet Dominate Nutrition Metabolism and Environmental Adaption of Faecalibacterium prausnitzii in Obese Children

in Systems Microbiology

Hui Li
Liping Zhao
Menghui Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2021.683714

5,900 views
10 citations

Original Research

Published on 31 May 2021

Characterising Post-mortem Bacterial Translocation Under Clinical Conditions Using 16S rRNA Gene Sequencing in Two Animal Models

in Systems Microbiology

Lily Gates
Nigel J. Klein
Neil J. Sebire
Dagmar G. Alber

Frontiers in Microbiology

doi 10.3389/fmicb.2021.649312

3,679 views
3 citations

Original Research

Published on 28 May 2021

Interactions Between Tsetse Endosymbionts and Glossina pallidipes Salivary Gland Hypertrophy Virus in Glossina Hosts

in Systems Microbiology

Güler Demirbas-Uzel
Antonios A. Augustinos
Vangelis Doudoumis
Andrew G. Parker
George Tsiamis
Kostas Bourtzis
Adly M. M. Abd-Alla

Frontiers in Microbiology

doi 10.3389/fmicb.2021.653880

3,014 views
6 citations

Original Research

Published on 28 May 2021

Variation of Metagenome From Feedstock to Digestate in Full-Scale Biogas Plants

in Systems Microbiology

Fan Jiang
Sen Wang
Yan Zhang
Shichun Ma
Yan Huang
Hui Fan
Qiang Li
Hengchao Wang
Anqi Wang
Hangwei Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2021.660225

3,624 views
7 citations

Original Research

Published on 28 May 2021

Interaction Between the Intestinal Microbial Community and Transcriptome Profile in Common Carp (Cyprinus carpio L.)

in Systems Microbiology

Shengyan Su
Xiaojun Jing
Chengfeng Zhang
Yiran Hou
Zhixun Li
Xingli Yang
Xiaolin Zhou
Pao Xu
Yongkai Tang
Jian Zhu

Frontiers in Microbiology

doi 10.3389/fmicb.2021.659602

5,494 views
15 citations

Original Research

Published on 21 May 2021

Reads Binning Improves the Assembly of Viral Genome Sequences From Metagenomic Samples

in Systems Microbiology

Kai Song

Frontiers in Microbiology

doi 10.3389/fmicb.2021.664560

4,595 views
3 citations

Original Research

Published on 19 May 2021

Implications of the Thermodynamic Response of Soil Mineralization, Respiration, and Nitrification on Soil Organic Matter Retention

in Systems Microbiology

Anne E. Taylor
Camille Ottoman
Frank Chaplen

Frontiers in Microbiology

doi 10.3389/fmicb.2021.651210

2,923 views
6 citations

Perspective

Published on 19 May 2021

Implementation of a Service-Learning Project Focused on Handwashing and Vaccinations Within an Undergraduate Microbiology Laboratory Course

in Systems Microbiology

Beth A. Potter

Frontiers in Microbiology

doi 10.3389/fmicb.2021.587094

1,581 views

Original Research

Published on 18 May 2021

Probiotics Bacillus licheniformis Improves Intestinal Health of Subclinical Necrotic Enteritis-Challenged Broilers

in Systems Microbiology

Liugang Kan
Fangshen Guo
Yan Liu
Van Hieu Pham
Yuming Guo
Zhong Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2021.623739

11,014 views
41 citations

Original Research

Published on 12 May 2021

Alterations of Serum Metabolites and Fecal Microbiota Involved in Ewe Follicular Cyst

in Systems Microbiology

Tao Feng
Hongxiang Ding
Jing Wang
Wei Xu
Yan Liu
Ákos Kenéz

Frontiers in Microbiology

doi 10.3389/fmicb.2021.675480

3,524 views
5 citations

Review

Published on 11 May 2021

Computational Biology and Machine Learning Approaches to Understand Mechanistic Microbiome-Host Interactions

in Systems Microbiology

Padhmanand Sudhakar
Kathleen Machiels
Bram Verstockt
Tamas Korcsmaros
Séverine Vermeire

Frontiers in Microbiology

doi 10.3389/fmicb.2021.618856

12,179 views
33 citations

Methods

Published on 05 May 2021

HCK and ABAA: A Newly Designed Pipeline to Improve Fungi Metabarcoding Analysis

in Systems Microbiology

Kodjovi D. Mlaga
Alban Mathieu
Charles Joly Beauparlant
Alban Ott
Ahmad Khodr
Olivier Perin
Arnaud Droit

Frontiers in Microbiology

doi 10.3389/fmicb.2021.640693

3,820 views

Review

Published on 03 May 2021

Towards a Systems Biology Approach to Understanding the Lichen Symbiosis: Opportunities and Challenges of Implementing Network Modelling

in Systems Microbiology

Hadi Nazem-Bokaee
Erik F. Y. Hom
Andrew C. Warden
Sarah Mathews
Cécile Gueidan

Frontiers in Microbiology

doi 10.3389/fmicb.2021.667864

10,626 views
22 citations

Original Research

Published on 30 Apr 2021

The Composition of the Microbiota in the Full-Term Fetal Gut and Amniotic Fluid: A Bovine Cesarean Section Study

in Systems Microbiology

Aleksi Husso
Leen Lietaer
Tiina Pessa-Morikawa
Thomas Grönthal
Jan Govaere
Ann Van Soom
Antti Iivanainen
Geert Opsomer
Mikael Niku

Frontiers in Microbiology

doi 10.3389/fmicb.2021.626421

5,382 views
31 citations

Original Research

Published on 29 Apr 2021

Correlation of Breed, Growth Performance, and Rumen Microbiota in Two Rustic Cattle Breeds Reared Under Different Conditions

in Systems Microbiology

Matteo Daghio
Francesca Ciucci
Arianna Buccioni
Alice Cappucci
Laura Casarosa
Andrea Serra
Giuseppe Conte
Carlo Viti
Breanne M. McAmmond
Jonathan D. Van Hamme

Frontiers in Microbiology

doi 10.3389/fmicb.2021.652031

4,976 views
33 citations

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Articles

Assessing the Response of Ruminal Bacterial and Fungal Microbiota to Whole-Rumen Contents Exchange in Dairy Cows

Gut Microbial SNPs Induced by High-Fiber Diet Dominate Nutrition Metabolism and Environmental Adaption of Faecalibacterium prausnitzii in Obese Children

Characterising Post-mortem Bacterial Translocation Under Clinical Conditions Using 16S rRNA Gene Sequencing in Two Animal Models

Interactions Between Tsetse Endosymbionts and Glossina pallidipes Salivary Gland Hypertrophy Virus in Glossina Hosts

Variation of Metagenome From Feedstock to Digestate in Full-Scale Biogas Plants

Interaction Between the Intestinal Microbial Community and Transcriptome Profile in Common Carp (Cyprinus carpio L.)

Reads Binning Improves the Assembly of Viral Genome Sequences From Metagenomic Samples

Implications of the Thermodynamic Response of Soil Mineralization, Respiration, and Nitrification on Soil Organic Matter Retention

Implementation of a Service-Learning Project Focused on Handwashing and Vaccinations Within an Undergraduate Microbiology Laboratory Course

Probiotics Bacillus licheniformis Improves Intestinal Health of Subclinical Necrotic Enteritis-Challenged Broilers

Alterations of Serum Metabolites and Fecal Microbiota Involved in Ewe Follicular Cyst

Computational Biology and Machine Learning Approaches to Understand Mechanistic Microbiome-Host Interactions

HCK and ABAA: A Newly Designed Pipeline to Improve Fungi Metabarcoding Analysis

Towards a Systems Biology Approach to Understanding the Lichen Symbiosis: Opportunities and Challenges of Implementing Network Modelling

The Composition of the Microbiota in the Full-Term Fetal Gut and Amniotic Fluid: A Bovine Cesarean Section Study

Correlation of Breed, Growth Performance, and Rumen Microbiota in Two Rustic Cattle Breeds Reared Under Different Conditions