Frontiers in Plant Science | Plant Genetics, Epigenetics and Chromosome Biology

Original Research

Accepted on 13 Feb 2025

Contrasting levels of transcriptome-wide SNP diversity and adaptative molecular variation among conifers

in Plant Genetics, Epigenetics and Chromosome Biology

Nathalie Pavy
Sébastien Gérardi
Julien Prunier
Philippe Rigault
Jérôme Laroche
Gaétan Daigle
Brian Boyle
John MacKay
Jean Bousquet

Frontiers in Plant Science

doi 10.3389/fpls.2025.1500759

Original Research

Published on 11 Feb 2025

Transcriptomic reprogramming and epigenetic regulation underlying pollination-dependent and auxin-induced fruit set in tomato

in Plant Genetics, Epigenetics and Chromosome Biology

Xiaohan Li
Bing He
Anis Djari
Pierre Frasse
Elie Maza
Farid Regad
Julien Pirrello
Guojian Hu
Mondher Bouzayen

Frontiers in Plant Science

doi 10.3389/fpls.2025.1495494

298 views

Original Research

Accepted on 07 Feb 2025

Revealing that artificial reproduction promotes increased genetic diversity between generations in Carpinus putoensis

in Plant Genetics, Epigenetics and Chromosome Biology

Dingsheng Li
Kai Gao
Yeping Chen
Haojie Gao
Haiming Huang
Bo Ye
Lei Shi
Haina Yu
Ying Zhao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1494694

Mini Review

Accepted on 07 Feb 2025

The generation of novel epialleles in plants: the prospective behind re-shaping the epigenome

in Plant Genetics, Epigenetics and Chromosome Biology

Alessio Baldini
Filippo Battaglia
Giorgio Perrella

Frontiers in Plant Science

doi 10.3389/fpls.2025.1544744

Original Research

Published on 06 Feb 2025

Genetic diversity of Rhododendron dauricum based on morphological traits and SSR markers

in Plant Genetics, Epigenetics and Chromosome Biology

Dan Wang
Ying Ma
Xueli Zhao
Ling Wang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1533824

279 views

Original Research

Published on 27 Jan 2025

The mutation atlas of giant kelp (Macrocystis pyrifera): a mutation database resource for natural knockouts

in Plant Genetics, Epigenetics and Chromosome Biology

Jose Francisco Diesel
Gary Molano
Sergey V. Nuzhdin

Frontiers in Plant Science

doi 10.3389/fpls.2024.1338572

356 views

Original Research

Published on 13 Jan 2025

Fade into you: genetic control of pigmentation patterns in red-flesh apple (Malus domestica)

in Plant Genetics, Epigenetics and Chromosome Biology

Pierre Bouillon
Etienne Belin
Anne-Laure Fanciullino
Sandrine Balzergue
Sylvain Hanteville
Yao Letekoma
Maryline Cournol
Fatima Faris
Andréa Bouanich
Dimitri Bréard

Frontiers in Plant Science

doi 10.3389/fpls.2024.1462545

654 views

Original Research

Published on 17 Dec 2024

Genome-wide association study reveals heat tolerance QTL for canopy-closure and early flowering in chickpea

in Plant Genetics, Epigenetics and Chromosome Biology

Cara Jeffrey
Brent Kaiser
Richard Trethowan
Laura Ziems

Frontiers in Plant Science

doi 10.3389/fpls.2024.1458250

697 views
2 citations

Review

Published on 17 Dec 2024

Cross-kingdom regulation of plant microRNAs: potential application in crop improvement and human disease therapeutics

in Plant Genetics, Epigenetics and Chromosome Biology

Lei Shi
Chao Guo
Miaomiao Fang
Yingmei Yang
Fei Yin
Yuan Shen

Frontiers in Plant Science

doi 10.3389/fpls.2024.1512047

989 views

Original Research

Published on 12 Dec 2024

Frequent variations and phylogenetic relationships within the genus Secale identified by ND-FISH according to the genome-wide universal oligonucleotides chromosome probes

in Plant Genetics, Epigenetics and Chromosome Biology

Zhi Li
Zixin Sun
Tianheng Ren

Frontiers in Plant Science

doi 10.3389/fpls.2024.1501642

481 views

Original Research

Published on 10 Dec 2024

Genome-wide identification and characterization of BASIC PENTACYSTEINE transcription factors and their binding motifs in coconut palm

in Plant Genetics, Epigenetics and Chromosome Biology

Zifen Lao
Jiali Mao
Runan Chen
Ran Xu
Zhuang Yang
Ying Wang
Junjie Zhou
Zhihua Mu
Hang Xu
Fengmei Li

Frontiers in Plant Science

doi 10.3389/fpls.2024.1491139

765 views

Original Research

Published on 06 Dec 2024

Comprehensive mapping of molecular cytogenetic markers in pitaya (Hylocereus undatus) and related species

in Plant Genetics, Epigenetics and Chromosome Biology

Arrashid Harun
Shipeng Song
Xixi You
Hui Liu
Xiaopeng Wen
Zhongming Fang
Zhihao Cheng
Chunli Chen

Frontiers in Plant Science

doi 10.3389/fpls.2024.1493776

794 views

Mini Review

Accepted on 03 Dec 2024

Advances in Epigenetic Studies of Plant Cadmium Stress

in Plant Genetics, Epigenetics and Chromosome Biology

GAO Yonggang
Wang TZfeng
Cheng Zhao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1489155

101 views

Original Research

Published on 12 Nov 2024

Kazakhstan tulips: comparative analysis of complete chloroplast genomes of four local and endangered species of the genus Tulipa L.

in Plant Genetics, Epigenetics and Chromosome Biology

Dilnur Tussipkan
Vladislav Shevtsov
Malika Ramazanova
Aizhan Rakhimzhanova
Alexandr Shevtsov
Shuga Manabayeva

Frontiers in Plant Science

doi 10.3389/fpls.2024.1433253

848 views
1 citation

Original Research

Published on 08 Nov 2024

Genetic characteristics of the diploid offsprings in potato Cooperation 88 induced by diploid donor IVP101

in Plant Genetics, Epigenetics and Chromosome Biology

Rongyan Wang
Yan Feng
Jing Peng
Chen Tan
Jian Zhou
Yang Hai
Youwei Luo
Dahai Hao
Canhui Li
Wei Tang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1486549

679 views

Original Research

Published on 04 Nov 2024

Chromosome-scale genome assembly of Codonopsis pilosula and comparative genomic analyses shed light on its genome evolution

in Plant Genetics, Epigenetics and Chromosome Biology

Bao-Zheng Chen
Zi-Jiang Yang
Ling Yang
Yi-Fan Zhu
Xu-Zhen Li
Lei Wang
Ye-Peng Zhou
Guang-Hui Zhang
Da-Wei Li
Yang Dong

Frontiers in Plant Science

doi 10.3389/fpls.2024.1469375

1,338 views
1 citation

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Articles

Contrasting levels of transcriptome-wide SNP diversity and adaptative molecular variation among conifers

Transcriptomic reprogramming and epigenetic regulation underlying pollination-dependent and auxin-induced fruit set in tomato

Revealing that artificial reproduction promotes increased genetic diversity between generations in Carpinus putoensis

The generation of novel epialleles in plants: the prospective behind re-shaping the epigenome

Genetic diversity of Rhododendron dauricum based on morphological traits and SSR markers

The mutation atlas of giant kelp (Macrocystis pyrifera): a mutation database resource for natural knockouts

Fade into you: genetic control of pigmentation patterns in red-flesh apple (Malus domestica)

Genome-wide association study reveals heat tolerance QTL for canopy-closure and early flowering in chickpea

Cross-kingdom regulation of plant microRNAs: potential application in crop improvement and human disease therapeutics

Frequent variations and phylogenetic relationships within the genus Secale identified by ND-FISH according to the genome-wide universal oligonucleotides chromosome probes

Genome-wide identification and characterization of BASIC PENTACYSTEINE transcription factors and their binding motifs in coconut palm

Comprehensive mapping of molecular cytogenetic markers in pitaya (Hylocereus undatus) and related species

Advances in Epigenetic Studies of Plant Cadmium Stress

Kazakhstan tulips: comparative analysis of complete chloroplast genomes of four local and endangered species of the genus Tulipa L.

Genetic characteristics of the diploid offsprings in potato Cooperation 88 induced by diploid donor IVP101

Chromosome-scale genome assembly of Codonopsis pilosula and comparative genomic analyses shed light on its genome evolution