Frontiers in Plant Science | Functional and Applied Plant Genomics

Original Research

Published on 25 Mar 2024

Genome-wide analysis of NPR1-like genes in citrus species and expression analysis in response to citrus canker (Xanthomonas axonopodis pv. citri)

in Functional and Applied Plant Genomics

Mobeen Ali
Muhammad Shafiq
Muhammad Zeshan Haider
Adnan Sami
Pravej Alam
Thamir Albalawi
Zuha Kamran
Saleh Sadiq
Mujahid Hussain
Muhammad Adnan Shahid

Frontiers in Plant Science

doi 10.3389/fpls.2024.1333286

2,567 views
10 citations

Original Research

Published on 21 Mar 2024

Genome-wide identification of GATA transcription factors in tetraploid potato and expression analysis in differently colored potato flesh

in Functional and Applied Plant Genomics

Xia Zhang
Rong Fan
Zhuo Yu
Xuerun Du
Xinyue Yang
Huiting Wang
Wenfeng Xu
Xiaoxia Yu

Frontiers in Plant Science

doi 10.3389/fpls.2024.1330559

1,569 views
2 citations

Original Research

Published on 19 Mar 2024

Dissection of quantitative trait nucleotides and candidate genes associated with agronomic and yield-related traits under drought stress in rapeseed varieties: integration of genome-wide association study and transcriptomic analysis

in Functional and Applied Plant Genomics

Maryam Salami
Bahram Heidari
Bahram Alizadeh
Jacqueline Batley
Jin Wang
Xiao-Li Tan
Ali Dadkhodaie
Christopher Richards

Frontiers in Plant Science

doi 10.3389/fpls.2024.1342359

3,064 views
11 citations

Original Research

Published on 18 Mar 2024

Genetic analysis of cassava brown streak disease root necrosis using image analysis and genome-wide association studies

in Functional and Applied Plant Genomics

Leah Nandudu
Christopher Strock
Alex Ogbonna
Robert Kawuki
Jean-Luc Jannink

Frontiers in Plant Science

doi 10.3389/fpls.2024.1360729

2,134 views

Original Research

Published on 13 Mar 2024

Chromosome-level genome of Thymus mandschuricus reveals molecular mechanism of aroma compounds biosynthesis

in Functional and Applied Plant Genomics

Lin Jia
Ning Xu
Bin Xia
Wenjie Gao
Qingran Meng
Qiang Li
Ying Sun
Shoubin Xu
Miao He
Huiyan Gu

Frontiers in Plant Science

doi 10.3389/fpls.2024.1368869

2,202 views

Original Research

Published on 11 Mar 2024

Physiological and biochemical mechanisms underlying the role of anthocyanin in acquired tolerance to salt stress in peanut (Arachis hypogaea L.)

in Functional and Applied Plant Genomics

Guanghui Li
Xin Guo
Yanbin Sun
Sunil S. Gangurde
Kun Zhang
Fubin Weng
Guanghao Wang
Huan Zhang
Aiqin Li
Xingjun Wang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1368260

3,977 views
9 citations

Original Research

Published on 07 Mar 2024

SUMOylation of OsPSTOL1 is essential for regulating phosphate starvation responses in rice and Arabidopsis

in Functional and Applied Plant Genomics

Vaishnavi Mukkawar
Dipan Roy
Kawinnat Sue-ob
Andrew Jones
Cunjin Zhang
Prakash Kumar Bhagat
Sumesh M. Kakkunnath
Sigrid Heuer
Ari Sadanandom

Frontiers in Plant Science

doi 10.3389/fpls.2024.1274610

2,409 views
1 citation

Original Research

Published on 07 Mar 2024

Genomic insights into the clonal reproductive Opuntia cochenillifera: mitochondrial and chloroplast genomes of the cochineal cactus for enhanced understanding of structural dynamics and evolutionary implications

in Functional and Applied Plant Genomics

Jing Liu
Yuqing Feng
Cheng Chen
Jing Yan
Xinyu Bai
Huiru Li
Chen Lin
Yinan Xiang
Wen Tian
Zhechen Qi

Frontiers in Plant Science

doi 10.3389/fpls.2024.1347945

2,370 views
1 citation

Original Research

Published on 06 Mar 2024

Novel SNP markers for flowering and seed quality traits in faba bean (Vicia faba L.): characterization and GWAS of a diversity panel

in Functional and Applied Plant Genomics

Hannah Ohm
Johanna Åstrand
Alf Ceplitis
Diana Bengtsson
Cecilia Hammenhag
Aakash Chawade
Åsa Grimberg

Frontiers in Plant Science

doi 10.3389/fpls.2024.1348014

4,473 views
3 citations

Original Research

Published on 06 Mar 2024

The complete mitochondrial genome of Aglaia odorata, insights into its genomic structure and RNA editing sites

in Functional and Applied Plant Genomics

Zhigang Hao
Zhiping Zhang
Jinan Zhang
Xiufen Cui
Jianqiang Li
Laixin Luo
Yingbin Li

Frontiers in Plant Science

doi 10.3389/fpls.2024.1362045

2,143 views
4 citations

Original Research

Published on 05 Mar 2024

Using ddRADseq to assess the genetic diversity of in-farm and gene bank cacao resources in the Baracoa region, eastern Cuba, for use and conservation purposes

in Functional and Applied Plant Genomics

Angel Rafael Ramirez-Ramirez
Khaled Mirzaei
Miguel Menéndez-Grenot
Pablo Clapé-Borges
Georgina Espinosa-Lopéz
Igor Bidot-Martínez
Pierre Bertin

Frontiers in Plant Science

doi 10.3389/fpls.2024.1367632

2,348 views
2 citations

Original Research

Published on 04 Mar 2024

Deep learning methods improve genomic prediction of wheat breeding

in Functional and Applied Plant Genomics

Abelardo Montesinos-López
Leonardo Crespo-Herrera
Susanna Dreisigacker
Guillermo Gerard
Paolo Vitale
Carolina Saint Pierre
Velu Govindan
Zerihun Tadesse Tarekegn
Moisés Chavira Flores
Paulino Pérez-Rodríguez

Frontiers in Plant Science

doi 10.3389/fpls.2024.1324090

3,825 views
5 citations

Original Research

Published on 28 Feb 2024

Identification of pleiotropic loci mediating structural and non-structural carbohydrate accumulation within the sorghum bioenergy association panel using high-throughput markers

in Functional and Applied Plant Genomics

Neeraj Kumar
J. Lucas Boatwright
Richard E. Boyles
Zachary W. Brenton
Stephen Kresovich

Frontiers in Plant Science

doi 10.3389/fpls.2024.1356619

2,102 views
2 citations

Original Research

Published on 26 Feb 2024

“Genome-wide identification of bZIP gene family in Pearl millet and transcriptional profiling under abiotic stress, phytohormonal treatments; and functional characterization of PgbZIP9”

in Functional and Applied Plant Genomics

Deepak Kumar Jha
Jeky Chanwala
Preeti Barla
Nrisingha Dey

Frontiers in Plant Science

doi 10.3389/fpls.2024.1352040

8,449 views
9 citations

Original Research

Published on 26 Feb 2024

Gene-edited Mtsoc1 triple mutant Medicago plants do not flower

in Functional and Applied Plant Genomics

Axel Poulet
Min Zhao
Yongyan Peng
FangFei Tham
Mauren Jaudal
Lulu Zhang
Josien C. van Wolfswinkel
Joanna Putterill

Frontiers in Plant Science

doi 10.3389/fpls.2024.1357924

2,774 views
6 citations

Original Research

Published on 23 Feb 2024

Comparative quantitative trait loci analysis framework reveals relationships between salt stress responsive phenotypes and pathways

in Functional and Applied Plant Genomics

Sunadda Phosuwan
Noppawan Nounjan
Piyada Theerakulpisut
Meechai Siangliw
Varodom Charoensawan

Frontiers in Plant Science

doi 10.3389/fpls.2024.1264909

3,451 views
3 citations