Original Research

Published on 02 Apr 2024

Transcriptome organization of white blood cells through gene co-expression network analysis in a large RNA-seq dataset

in Systems Immunology

Paola Forabosco
Mauro Pala
Francesca Crobu
Maria Antonietta Diana
Mara Marongiu
Roberto Cusano
Andrea Angius
Maristella Steri
Valeria Orrù
David Schlessinger

Frontiers in Immunology

doi 10.3389/fimmu.2024.1350111

1,568 views

Original Research

Published on 02 Apr 2024

Experimental trials of predicted CD4+ and CD8+ T-cell epitopes of respiratory syncytial virus

in Systems Immunology

Syeda Tahira Qousain Naqvi
Syed Aun Muhammad
Jinlei Guo
Sidra Zafar
Amjad Ali
Larry J. Anderson
Christina A. Rostad
Baogang Bai

Frontiers in Immunology

doi 10.3389/fimmu.2024.1349749

2,277 views

Review

Published on 02 Apr 2024

New insight into arginine and tryptophan metabolism in macrophage activation during tuberculosis

in Systems Immunology

Kangling Zhang
Abhishek Mishra
Chinnaswamy Jagannath

Frontiers in Immunology

doi 10.3389/fimmu.2024.1363938

4,278 views
2 citations

Original Research

Published on 28 Mar 2024

Bioinformatic validation and machine learning-based exploration of purine metabolism-related gene signatures in the context of immunotherapeutic strategies for nonspecific orbital inflammation

in Systems Immunology

Zixuan Wu
Chi Fang
Yi Hu
Xin Peng
Zheyuan Zhang
Xiaolei Yao
Qinghua Peng

Frontiers in Immunology

doi 10.3389/fimmu.2024.1318316

2,991 views
1 citation

Original Research

Published on 26 Mar 2024

Unraveling IFN-I response dynamics and TNF crosstalk in the pathophysiology of systemic lupus erythematosus

in Systems Immunology

Laura C. Van Eyndhoven
Eleni Chouri
Catarina I. Matos
Aridaman Pandit
Timothy R. D. J. Radstake
Jasper C. A. Broen
Abhyudai Singh
Jurjen Tel

Frontiers in Immunology

doi 10.3389/fimmu.2024.1322814

1,715 views
2 citations

Review

Published on 12 Mar 2024

MHCII-peptide presentation: an assessment of the state-of-the-art prediction methods

in Systems Immunology

Yaqing Yang
Zhonghui Wei
Gabriel Cia
Xixi Song
Fabrizio Pucci
Marianne Rooman
Fuzhong Xue
Qingzhen Hou

Frontiers in Immunology

doi 10.3389/fimmu.2024.1293706

3,804 views
3 citations

Original Research

Published on 08 Mar 2024

Structure-guided engineering and molecular simulations to design a potent monoclonal antibody to target aP2 antigen for adaptive immune response instigation against type 2 diabetes

in Systems Immunology

Abbas Khan
Muhammad Ammar Zahid
Anwar Mohammad
Abdelali Agouni

Frontiers in Immunology

doi 10.3389/fimmu.2024.1357342

1,931 views
1 citation

Original Research

Published on 06 Mar 2024

Exploring potential biomarkers and therapeutic targets in inflammatory bowel disease: insights from a mega-analysis approach

in Systems Immunology

Edia Stemmer
Tamar Zahavi
Maoz Kellerman
Liat Anabel Sinberger
Guy Shrem
Mali Salmon‐Divon

Frontiers in Immunology

doi 10.3389/fimmu.2024.1353402

2,839 views
3 citations

Review

Published on 01 Mar 2024

Interferon lambda in respiratory viral infection: immunomodulatory functions and antiviral effects in epithelium

in Systems Immunology

Yong-Guang Liu
Su-Wei Jin
Shan-Shan Zhang
Tian-Ji Xia
Yong-Hong Liao
Rui-Le Pan
Ming-Zhu Yan
Qi Chang

Frontiers in Immunology

doi 10.3389/fimmu.2024.1338096

4,025 views
1 citation

Original Research

Published on 28 Feb 2024

Investigating the ability of deep learning-based structure prediction to extrapolate and/or enrich the set of antibody CDR canonical forms

in Systems Immunology

Alexander Greenshields-Watson
Brennan Abanades
Charlotte M. Deane

Frontiers in Immunology

doi 10.3389/fimmu.2024.1352703

3,023 views
3 citations

Methods

Published on 26 Feb 2024

Utilizing murine dendritic cell line DC2.4 to evaluate the immunogenicity of subunit vaccines in vitro

in Systems Immunology

Lantian Lu
Wei Yang Kong
Jiahui Zhang
Farrhana Firdaus
James W. Wells
Rachel J. Stephenson
Istvan Toth
Mariusz Skwarczynski
Jazmina L. Gonzalez Cruz

Frontiers in Immunology

doi 10.3389/fimmu.2024.1298721

5,814 views
1 citation

Original Research

Published on 26 Feb 2024

An integrative mechanistic model of thymocyte dynamics

in Systems Immunology

Victoria Kulesh
Kirill Peskov
Gabriel Helmlinger
Gennady Bocharov

Frontiers in Immunology

doi 10.3389/fimmu.2024.1321309

1,708 views
1 citation

Original Research

Published on 23 Feb 2024

CD8+ T and NK cells characterized by upregulation of NPEPPS and ABHD17A are associated with the co-occurrence of type 2 diabetes and coronary artery disease

in Systems Immunology

Chenyu Dai
Damu Wang
Qianqian Tao
Ziyi Li
Peng Zhai
Yingying Wang
Mei Hou
Simin Cheng
Wei Qi
Longyi Zheng

Frontiers in Immunology

doi 10.3389/fimmu.2024.1267963

2,209 views
1 citation

Original Research

Published on 22 Feb 2024

Comprehensive bioinformatics analysis and systems biology approaches to identify the interplay between COVID-19 and pericarditis

in Systems Immunology

Daisong Li
Ruolan Chen
Chao Huang
Guoliang Zhang
Zhaoqing Li
Xiaojian Xu
Banghui Wang
Bing Li
Xian-Ming Chu

Frontiers in Immunology

doi 10.3389/fimmu.2024.1264856

1,766 views
1 citation

Original Research

Published on 21 Feb 2024

Unveiling macrophage diversity in myocardial ischemia-reperfusion injury: identification of a distinct lipid-associated macrophage subset

in Systems Immunology

Ying Jiang
Wenpeng Yu
Tie Hu
Hanzhi Peng
Fajia Hu
Yong Yuan
Xufeng Liu
Songqing Lai
Jianliang Zhou
Xiao Dong

Frontiers in Immunology

doi 10.3389/fimmu.2024.1335333

4,345 views
1 citation

Hypothesis and Theory

Published on 21 Feb 2024

The integrated bioinformatic analysis identifies immune microenvironment-related potential biomarkers for patients with gestational diabetes mellitus

in Systems Immunology

Jie-ling Chen
Hui-fang Dai
Xin-chen Kan
Jie Wu
Hong-Wu Chen

Frontiers in Immunology

doi 10.3389/fimmu.2024.1296855

1,400 views
1 citation

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Articles

Transcriptome organization of white blood cells through gene co-expression network analysis in a large RNA-seq dataset

Experimental trials of predicted CD4+ and CD8+ T-cell epitopes of respiratory syncytial virus

New insight into arginine and tryptophan metabolism in macrophage activation during tuberculosis

Bioinformatic validation and machine learning-based exploration of purine metabolism-related gene signatures in the context of immunotherapeutic strategies for nonspecific orbital inflammation

Unraveling IFN-I response dynamics and TNF crosstalk in the pathophysiology of systemic lupus erythematosus

MHCII-peptide presentation: an assessment of the state-of-the-art prediction methods

Structure-guided engineering and molecular simulations to design a potent monoclonal antibody to target aP2 antigen for adaptive immune response instigation against type 2 diabetes

Exploring potential biomarkers and therapeutic targets in inflammatory bowel disease: insights from a mega-analysis approach

Interferon lambda in respiratory viral infection: immunomodulatory functions and antiviral effects in epithelium

Investigating the ability of deep learning-based structure prediction to extrapolate and/or enrich the set of antibody CDR canonical forms

Utilizing murine dendritic cell line DC2.4 to evaluate the immunogenicity of subunit vaccines in vitro

An integrative mechanistic model of thymocyte dynamics

CD8+ T and NK cells characterized by upregulation of NPEPPS and ABHD17A are associated with the co-occurrence of type 2 diabetes and coronary artery disease

Comprehensive bioinformatics analysis and systems biology approaches to identify the interplay between COVID-19 and pericarditis

Unveiling macrophage diversity in myocardial ischemia-reperfusion injury: identification of a distinct lipid-associated macrophage subset

The integrated bioinformatic analysis identifies immune microenvironment-related potential biomarkers for patients with gestational diabetes mellitus