Original Research

Published on 08 Nov 2021

Development of a Machine Learning Classifier for Brain Tumors Diagnosis Based on DNA Methylation Profile

in Network Bioinformatics

Yuxing Chen
Yixin Yan
Moping Xu
Wen Chen
Jinyu Lin
Yan Zhao
Junze Wu
Xianlong Wang

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.744345

3,950 views
3 citations

Perspective

Published on 27 Oct 2021

Chromatin Network Analyses: Towards Structure-Function Relationships in Epigenomics

in Network Bioinformatics

Vera Pancaldi

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.742216

5,136 views
7 citations

Methods

Published on 14 Oct 2021

Insight to Gene Expression From Promoter Libraries With the Machine Learning Workflow Exp2Ipynb

in Network Bioinformatics

Ulf W. Liebal
Sebastian Köbbing
Linus Netze
Artur M. Schweidtmann
Alexander Mitsos
Lars M. Blank

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.747428

3,526 views
6 citations

Review

Published on 12 Oct 2021

The Clinicopathologic and Prognostic Significance of c-Myc Expression in Hepatocellular Carcinoma: A Meta-Analysis

in Network Bioinformatics

Zhao Min
Zhang Xunlei
Chen Haizhen
Zhao Wenjing
Yu Haiyan
Lu Xiaoyun
Zhou Jianyun
Chen Xudong
Shen Aiguo

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.706835

3,115 views
9 citations

Perspective

Published on 22 Sep 2021

Machine Learning for Causal Inference in Biological Networks: Perspectives of This Challenge

in Network Bioinformatics

Paola Lecca

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.746712

36,403 views
30 citations

Original Research

Published on 14 Sep 2021

Differential Interactome Based Drug Repositioning Unraveled Abacavir, Exemestane, Nortriptyline Hydrochloride, and Tolcapone as Potential Therapeutics for Colorectal Cancers

in Network Bioinformatics

Hande Beklen
Sema Arslan
Gizem Gulfidan
Beste Turanli
Pemra Ozbek
Betul Karademir Yilmaz
Kazim Yalcin Arga

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.710591

2,908 views
5 citations

Review

Published on 08 Sep 2021

Detecting Rewiring Events in Protein-Protein Interaction Networks Based on Transcriptomic Data

in Network Bioinformatics

Markus Hollander
Trang Do
Thorsten Will
Volkhard Helms

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.724297

4,556 views
6 citations

Original Research

Published on 06 Sep 2021

Large-Scale Protein Interactions Prediction by Multiple Evidence Analysis Associated With an In-Silico Curation Strategy

in Network Bioinformatics

Yasmmin Côrtes Martins
Artur Ziviani
Marisa Fabiana Nicolás
Ana Tereza Ribeiro de Vasconcelos

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.731345

4,733 views
3 citations

Original Research

Published on 30 Aug 2021

Mutation Edgotype Drives Fitness Effect in Human

in Network Bioinformatics

Mohamed Ghadie
Yu Xia

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.690769

2,406 views
3 citations

Brief Research Report

Published on 30 Aug 2021

Protein Complex Organization Imposes Constraints on Proteome Dysregulation in Cancer

in Network Bioinformatics

Gökçe Senger
Martin H. Schaefer

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.723482

2,071 views
4 citations

Original Research

Published on 13 Aug 2021

Dynamic Solution Space Division-Based Methods for Calculating Reaction Deletion Strategies for Constraint-Based Metabolic Networks for Substance Production: DynCubeProd

in Network Bioinformatics

Yier Ma
Takeyuki Tamura

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.716112

1,131 views

Original Research

Published on 19 Jul 2021

Identification of Biomarkers Controlling Cell Fate In Blood Cell Development

in Network Bioinformatics

Maryam Nazarieh
Marc Hoeppner
Volkhard Helms

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.653054

2,386 views

Brief Research Report

Published on 08 Jun 2021

N-Glycosylation Network Construction and Analysis to Modify Glycans on the Spike (S) Glycoprotein of SARS-CoV-2

in Network Bioinformatics

Sridevi Krishnan
Giri P. Krishnan

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.667012

2,476 views
6 citations

Original Research

Published on 29 Apr 2021

Predicting Anticancer Drug Response With Deep Learning Constrained by Signaling Pathways

in Network Bioinformatics

Heming Zhang
Yixin Chen
Fuhai Li

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.639349

11,714 views
30 citations

Navigation group

Articles

Development of a Machine Learning Classifier for Brain Tumors Diagnosis Based on DNA Methylation Profile

Chromatin Network Analyses: Towards Structure-Function Relationships in Epigenomics

Insight to Gene Expression From Promoter Libraries With the Machine Learning Workflow Exp2Ipynb

The Clinicopathologic and Prognostic Significance of c-Myc Expression in Hepatocellular Carcinoma: A Meta-Analysis

Machine Learning for Causal Inference in Biological Networks: Perspectives of This Challenge

Differential Interactome Based Drug Repositioning Unraveled Abacavir, Exemestane, Nortriptyline Hydrochloride, and Tolcapone as Potential Therapeutics for Colorectal Cancers

Detecting Rewiring Events in Protein-Protein Interaction Networks Based on Transcriptomic Data

Large-Scale Protein Interactions Prediction by Multiple Evidence Analysis Associated With an In-Silico Curation Strategy

Mutation Edgotype Drives Fitness Effect in Human

Protein Complex Organization Imposes Constraints on Proteome Dysregulation in Cancer

Dynamic Solution Space Division-Based Methods for Calculating Reaction Deletion Strategies for Constraint-Based Metabolic Networks for Substance Production: DynCubeProd

Identification of Biomarkers Controlling Cell Fate In Blood Cell Development

N-Glycosylation Network Construction and Analysis to Modify Glycans on the Spike (S) Glycoprotein of SARS-CoV-2

Predicting Anticancer Drug Response With Deep Learning Constrained by Signaling Pathways